Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ctpA_1Cation efflux transporter. (183 aa)    
Predicted Functional Partners:
Lrub_0771
Metallo-beta lactamase family transporter protein.
  
   0.793
Lrub_0773
Phosphoribosylpyrophosphate synthetase; Belongs to the ribose-phosphate pyrophosphokinase family.
  
    0.775
Lrub_0770
Chemiosmotic efflux system B protein A.
       0.773
Lrub_0772
Thymidine phosphorylase.
       0.771
Lrub_0774
Hypothetical protein.
       0.669
Lrub_0478
Hypothetical protein; Belongs to the UPF0276 family.
   
    0.589
lvhB3
Type IV secretion system protein VirB3.
   
    0.585
Lrub_0476
Signal peptide protein.
   
    0.569
copA_1
Copper transporting P-type ATPase.
   
   0.568
atpH
ATP synthase F1 subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
   
  0.521
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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