STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cecCChemiosmotic efflux system C protein C. (437 aa)    
Predicted Functional Partners:
cecB
Chemiosmotic efflux system C protein B; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.948
cecA_1
Chemiosmotic efflux system protein A-like protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.915
cecA_2
Chemiosmotic efflux system C protein A.
       0.800
Lrub_0743
Membrane protein.
  
     0.758
Lrub_0750
Hypothetical protein.
  
     0.758
Lrub_0745
TraU protein.
  
     0.756
Lrub_0746
Type IV secretory protein VirB4 component.
  
    0.754
Lrub_0744
Tfp pilus assembly, pilus retraction ATPase PilT.
  
     0.752
Lrub_0757
Bile acid beta-glucosidase.
  
     0.752
Lrub_1813
Membrane protein.
  
     0.752
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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