STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_0784Hypothetical protein. (162 aa)    
Predicted Functional Partners:
copA2
Copper efflux ATPase.
 
     0.845
atpC_1
F-type H -transporting ATPase epsilon chain.
  
     0.759
Lrub_0728
4-diphosphocytidyl-2-methyl-D-erythritol synthase.
  
     0.741
Lrub_0732
Hypothetical protein.
  
     0.731
Lrub_0800
ATP synthase protein I.
  
     0.728
Lrub_0756
Hypothetical protein.
  
     0.721
Lrub_0795
Hypothetical protein; ATP synthase subunit gamma C-terminus.
  
     0.707
Lrub_0757
Bile acid beta-glucosidase.
  
     0.706
Lrub_0755
Hypothetical protein.
  
     0.702
Lrub_1505
Hypothetical protein.
  
     0.696
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.