STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_0826Regulatory protein (GGDEF and EAL domains). (559 aa)    
Predicted Functional Partners:
Lrub_1459
Regulatory protein (GGDEF and EAL domains).
 
0.899
Lrub_0189
GGDEF domain-containing sensory box protein.
 
0.898
Lrub_0168
Sensory box protein.
 
0.871
stuC_1
Sensor histidine kinase.
 
0.850
Lrub_0131
Regulatory protein (GGDEF and EAL domains).
   
 0.824
Lrub_2746
Regulatory protein (GGDEF, EAL, PAS and PAC domains).
 0.816
smc_4
Chromosome partition protein Smc.
  
 0.791
Lrub_2753
Regulatory protein (GGDEF, PAS, PAC domains).
0.775
gacS/letS
Transmission sensor LetS.
 
 
 0.774
Lrub_0394
Sensor histidine kinase.
  
 0.751
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.