yhbH protein (Legionella rubrilucens) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Score

yhbH

Ribosome-associated, sigma 54 modulation protein. (97 aa)

Predicted Functional Partners:

rpsI

0.965

rpsF

0.965

rpsB

0.960

rpsR

0.960

rpsO

0.960

rpsQ

0.960

rpsC

0.960

ptsN

0.956

rpmB

0.955

rpmG

0.954

Your Current Organism:

Legionella rubrilucens

NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ptsN	yhbH	Lrub_0845	Lrub_0846	Nitrogen regulatory protein.	Ribosome-associated, sigma 54 modulation protein.	0.956
rpmB	rpmG	Lrub_0853	Lrub_0852	50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.999
rpmB	rpsB	Lrub_0853	Lrub_0255	50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.996
rpmB	rpsC	Lrub_0853	Lrub_2503	50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.993
rpmB	rpsF	Lrub_0853	Lrub_0617	50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.997
rpmB	rpsI	Lrub_0853	Lrub_0314	50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.994
rpmB	rpsO	Lrub_0853	Lrub_1654	50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.995
rpmB	rpsQ	Lrub_0853	Lrub_2500	50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.987
rpmB	rpsR	Lrub_0853	Lrub_0616	50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.996
rpmB	yhbH	Lrub_0853	Lrub_0846	50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	Ribosome-associated, sigma 54 modulation protein.	0.955
rpmG	rpmB	Lrub_0852	Lrub_0853	50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.999
rpmG	rpsB	Lrub_0852	Lrub_0255	50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.989
rpmG	rpsC	Lrub_0852	Lrub_2503	50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.994
rpmG	rpsF	Lrub_0852	Lrub_0617	50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.992
rpmG	rpsI	Lrub_0852	Lrub_0314	50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.994
rpmG	rpsO	Lrub_0852	Lrub_1654	50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.994
rpmG	rpsQ	Lrub_0852	Lrub_2500	50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.988
rpmG	rpsR	Lrub_0852	Lrub_0616	50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.996
rpmG	yhbH	Lrub_0852	Lrub_0846	50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	Ribosome-associated, sigma 54 modulation protein.	0.954
rpsB	rpmB	Lrub_0255	Lrub_0853	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.996