STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Lrub_0931Serine metalloprotease; Belongs to the peptidase S8 family. (556 aa)    
Predicted Functional Partners:
sahH
S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
     
 0.721
Lrub_1611
Aminopeptidase.
  
  
 0.721
lasB
Virulence metalloprotease; Extracellular zinc metalloprotease.
 
  
 0.703
Lrub_2068
Regulatory protein (GGDEF and EAL domains).
 
 
 
 0.702
Lrub_2824
Chitinase.
  
   
 0.679
chiA
Chitinase A precursor.
  
 
 
 0.675
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
       0.652
Lrub_0694
Hypothetical protein.
   
 0.624
Lrub_0695
Hypothetical protein.
   
 0.624
Lrub_1458
PAP2 superfamily protein.
   
 0.624
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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