Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lrub_1009Bacterial regulatory protein, luxR family. (275 aa)    
Predicted Functional Partners:
gacS/letS
Transmission sensor LetS.
     
 0.843
stuC_1
Sensor histidine kinase.
     
 0.551
Lrub_0132
Metallo-beta-lactamase L1 precursor.
    
   0.523
gloB
Hydroxyacylglutathione hydrolase (glyoxalase II); Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
    
   0.523
psuG
Indigoidine synthase A-like protein involved in pigment biosynthesis; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.
    
 0.510
Lrub_0436
LuxR family transcriptional regulator.
   
 0.505
Lrub_0810
Lipolytic enzyme / transcription regulator protein.
   
 0.505
Lrub_2047
Response regulator GacA.
   
 0.505
Lrub_0131
Regulatory protein (GGDEF and EAL domains).
     
 0.496
recQ
ATP-dependent DNA helicase RecQ.
     
  0.433
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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