STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atoBAcyl CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (396 aa)    
Predicted Functional Partners:
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.999
yfcX
Enoyl CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.999
pksG
Polyketide biosynthesis 3-hydroxy-3-methylglutaryl-ACP synthase PksG.
 
 0.974
Lrub_1019
Enoyl CoA hydratase/isomerase (crotonase).
 
 0.902
Lrub_1023
Acyl CoA dehydrogenase.
  
  0.901
pta_1
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
  
 0.850
pta_2
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
  
 0.850
mvaB
hydroxymethylglutaryl-CoA lyase.
  
 
 0.799
Lrub_2292
3-hydroxyisobutyryl-CoA hydrolase.
 
 0.798
Lrub_1020
Acetyl/propionyl-CoA carboxylase, beta subunit.
  
 
 0.793
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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