STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_1023Acyl CoA dehydrogenase. (386 aa)    
Predicted Functional Partners:
Lrub_1020
Acetyl/propionyl-CoA carboxylase, beta subunit.
 
 
 0.993
yfcX
Enoyl CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.989
Lrub_1018
Acyl CoA carboxylase subunit alpha.
  
 0.980
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.961
Lrub_1019
Enoyl CoA hydratase/isomerase (crotonase).
 
 0.951
atoB
Acyl CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.943
etfA
Electron transfer flavoprotein subunit alpha.
 
 0.914
odp
Branched-chain alpha-keto acid dehydrogenase subunit E2.
   
  0.862
mvaB
hydroxymethylglutaryl-CoA lyase.
 
 0.812
Lrub_1024
Hypothetical protein.
   
  0.805
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.