STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_1028Hypothetical protein. (289 aa)    
Predicted Functional Partners:
Lrub_1029
Hypothetical protein.
 
     0.948
Lrub_0162
Bacterioferritin (cytochrome b1); Belongs to the Dps family.
  
  
 0.549
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.542
Lrub_2071
Hemerythrin HHE cation binding domain protein.
  
     0.540
Lrub_1030
Cyanophycinase; Belongs to the peptidase S51 family.
       0.513
Lrub_0343
Putative Acetyltransferase, GNAT family.
  
     0.498
Lrub_2395
Hypothetical protein.
 
     0.464
Lrub_0431
Hypothetical protein.
 
     0.451
msrA
Bifunctional methionine sulfoxide reductase B/A protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.445
Lrub_1932
Cytosolic IMP-GMP specific 5'-nucleotidase.
  
     0.424
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.