Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lrub_0932 | Lrub_0933 | Lrub_0932 | Lrub_0933 | Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.983 |
Lrub_0932 | Lrub_1044 | Lrub_0932 | Lrub_1044 | Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Outer membrane protein TolC. | 0.686 |
Lrub_0932 | Lrub_2192 | Lrub_0932 | Lrub_2192 | Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Hemolysin D. | 0.493 |
Lrub_0932 | acrA | Lrub_0932 | Lrub_1067 | Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | RND efflux membrane fusion protein, acriflavin resistance protein E; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.912 |
Lrub_0933 | Lrub_0932 | Lrub_0933 | Lrub_0932 | Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.983 |
Lrub_0933 | Lrub_1044 | Lrub_0933 | Lrub_1044 | Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Outer membrane protein TolC. | 0.698 |
Lrub_0933 | Lrub_2192 | Lrub_0933 | Lrub_2192 | Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Hemolysin D. | 0.669 |
Lrub_0933 | acrA | Lrub_0933 | Lrub_1067 | Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | RND efflux membrane fusion protein, acriflavin resistance protein E; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.515 |
Lrub_1044 | Lrub_0932 | Lrub_1044 | Lrub_0932 | Outer membrane protein TolC. | Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.686 |
Lrub_1044 | Lrub_0933 | Lrub_1044 | Lrub_0933 | Outer membrane protein TolC. | Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.698 |
Lrub_1044 | Lrub_1558 | Lrub_1044 | Lrub_1558 | Outer membrane protein TolC. | Hemolysin D. | 0.711 |
Lrub_1044 | Lrub_2192 | Lrub_1044 | Lrub_2192 | Outer membrane protein TolC. | Hemolysin D. | 0.690 |
Lrub_1044 | acrA | Lrub_1044 | Lrub_1067 | Outer membrane protein TolC. | RND efflux membrane fusion protein, acriflavin resistance protein E; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.751 |
Lrub_1044 | lssD_1 | Lrub_1044 | Lrub_0047 | Outer membrane protein TolC. | Secretion system protein D. | 0.695 |
Lrub_1044 | lssD_2 | Lrub_1044 | Lrub_0172 | Outer membrane protein TolC. | Secretion system protein D. | 0.699 |
Lrub_1044 | lssD_3 | Lrub_1044 | Lrub_0508 | Outer membrane protein TolC. | Secretion system protein D. | 0.697 |
Lrub_1044 | pcm | Lrub_1044 | Lrub_1045 | Outer membrane protein TolC. | protein-L-isoaspartate-O-methyltransferase. | 0.791 |
Lrub_1044 | ydaO | Lrub_1044 | Lrub_1043 | Outer membrane protein TolC. | C32 tRNA thiolase; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system. | 0.756 |
Lrub_1558 | Lrub_1044 | Lrub_1558 | Lrub_1044 | Hemolysin D. | Outer membrane protein TolC. | 0.711 |
Lrub_1558 | lssD_1 | Lrub_1558 | Lrub_0047 | Hemolysin D. | Secretion system protein D. | 0.466 |
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