STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_1051IcmL-like protein. (315 aa)    
Predicted Functional Partners:
yjeA
Endo-1,4-beta-xylanase.
 
     0.829
Lrub_2577
Coiled-coil protein.
  
 
 0.771
Lrub_0298
DotA.
  
     0.769
Lrub_2009
Protein IcmE (DotG).
  
    0.769
Lrub_2608
Putative helicase/relaxase.
  
 
   0.768
Lrub_2014
Protein IcmB (DotO).
  
     0.765
dotC
Defect in organelle trafficking lipoprotein DotC.
  
     0.764
hutG
Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.
       0.764
Lrub_2003
Protein IcmO (DotL).
  
     0.761
Lrub_2783
Hypothetical protein.
  
     0.755
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.