Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Lrub_1088DNA-binding protein; Belongs to the Dps family. (144 aa)    
Predicted Functional Partners:
clpS
Regulatory protein for ClpA substrate specificity; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.920
Lrub_2796
Serine transporter.
    
   0.832
Lrub_1614
Serine protein kinase.
   
    0.775
Lrub_1416
OsmC-like protein.
  
  
 0.750
wrbA_1
Flavoprotein WrbA (Trp repressor binding protein); Belongs to the WrbA family.
   
  
 0.692
wrbA_2
Flavoprotein WrbA (Trp repressor binding protein).
   
  
 0.692
yhbH
Ribosome-associated, sigma 54 modulation protein.
   
    0.660
Lrub_0917
Hypothetical protein.
  
  
 0.645
Lrub_2111
Transcriptional regulator BolA; Belongs to the BolA/IbaG family.
   
  
 0.634
Lrub_1089
Spermidine synthase.
     
 0.627
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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