STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_1088DNA-binding protein; Belongs to the Dps family. (144 aa)    
Predicted Functional Partners:
clpS
Regulatory protein for ClpA substrate specificity; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.966
yhbH
Ribosome-associated, sigma 54 modulation protein.
   
    0.716
Lrub_0917
Hypothetical protein.
  
  
 0.659
Lrub_1416
OsmC-like protein.
  
  
 0.651
Lrub_2019
Alkylhydroperoxide reductase, AhpC/TSA family.
  
  
 0.632
ahpC
Alkyl hydroperoxide reductase.
  
  
 0.632
Lrub_1614
Serine protein kinase.
   
    0.616
Lrub_1089
Spermidine synthase.
       0.610
wrbA_1
Flavoprotein WrbA (Trp repressor binding protein); Belongs to the WrbA family.
   
  
 0.585
wrbA_2
Flavoprotein WrbA (Trp repressor binding protein).
   
  
 0.585
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.