STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_1120Hypothetical protein. (260 aa)    
Predicted Functional Partners:
Lrub_2009
Protein IcmE (DotG).
  
     0.702
Lrub_1121
Peptide maturation protein PmbA.
       0.614
Lrub_2016
IcmF.
  
     0.591
Lrub_2800
Hypothetical protein; N-terminal GNAT family acetyltransferase.
  
     0.590
Lrub_2017
IcmH (DotU).
  
     0.581
lvrA
Legionella vir region protein.
  
     0.552
Lrub_2606
Cysteine protease.
  
     0.547
Lrub_1566
Protein-tyrosine phosphatase.
  
     0.538
rir1
Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
       0.528
Lrub_0099
Polysaccharide deacetylase.
  
     0.527
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.