STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxBThioredoxin reductase. (319 aa)    
Predicted Functional Partners:
Lrub_2619
Putative thioredoxin 1; Belongs to the thioredoxin family.
 
 0.988
trxA
Thioredoxin.
 
 0.883
trxA3
Thioredoxin; Belongs to the thioredoxin family.
 
 0.881
Lrub_0793
Oxidoreductase, FAD-binding protein.
   
 
 0.871
Lrub_2019
Alkylhydroperoxide reductase, AhpC/TSA family.
  
 
 0.855
ahpC
Alkyl hydroperoxide reductase.
  
 
 0.855
fadH
2,4-dienoyl-CoA reductase FadH1.
  
 
 0.805
aat
leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.
       0.790
Lrub_0166
Sensory box histidine kinase/response regulator.
 
 
 0.672
ftsK
Cell division protein FtsK.
 
    0.665
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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