STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_1146Pre-pilin leader sequence (pilV). (158 aa)    
Predicted Functional Partners:
Lrub_1143
Type IV fimbrial biogenesis PilY1-like protein.
 
  
 0.995
Lrub_1144
Tfp pilus assembly protein PilX.
 
  
 0.995
Lrub_1145
Tfp pilus assembly protein PilW.
 
  
 0.992
pilE_1
Type-IV pilin.
 
  
 0.970
Lrub_0567
Type IV pre-pilin.
 
  
 0.948
pilN
Tfp pilus assembly protein PilN.
 
  
 0.826
Lrub_1178
Type IV pilus biogenesis protein PilP.
  
  
 0.800
Lrub_2188
Hypothetical protein.
  
  
 0.794
Lrub_1177
Type IV pilus biogenesis protein PilO.
 
   
 0.790
pilM
Tfp pilus assembly protein, ATPase PilM.
 
   
 0.782
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.