Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lrub_1163Glycosyl transferase, group 2 family protein. (239 aa)    
Predicted Functional Partners:
Lrub_1161
Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
 
 0.995
Lrub_1164
lipid-A-disaccharide synthase.
 
     0.958
Lrub_1162
Putative membrane-associated phospholipid phosphatase.
    
  0.885
Lrub_0573
Polysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.744
pdxB
Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate.
       0.744
Lrub_1160
Transmembrane protein.
       0.744
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
 0.633
ugd
UDP-glucose 6-dehydrogenase.
 
  
 0.618
capI_2
Protein capI.
 
 
 0.605
capI_1
Protein capI.
 
 
 0.533
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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