Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lrub_1165Dolichol monophosphate mannose synthase. (488 aa)    
Predicted Functional Partners:
Lrub_1166
Hypothetical protein.
       0.611
ugd
UDP-glucose 6-dehydrogenase.
  
  
 0.576
Lrub_1765
Flagellar hook-length control protein FliK.
  
     0.553
Lrub_1275
Putative asmA protein.
  
     0.543
Lrub_1163
Glycosyl transferase, group 2 family protein.
 
 
 0.528
Lrub_2358
Hypothetical protein.
  
     0.510
galU
Glucose-1-phosphate uridylyltransferase.
     
 0.493
Lrub_0337
Two component response regulator.
  
     0.489
Lrub_1426
Thaumatin domain-containing protein.
  
     0.478
Lrub_1300
Leucine-rich repeat protein substrate of the Dot/Icm secretion system.
  
     0.463
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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