yrbD protein (Legionella rubrilucens) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

yrbD

Toluene transporter subunit: membrane component of ABC superfamily protein. (158 aa)

Predicted Functional Partners:

ttg2B

0.999

ttg2A

0.998

ttg2D

0.993

Lrub_0264

0.990

Lrub_0265

0.980

Lrub_1232

0.943

Lrub_0992

0.798

Lrub_1916

0.779

Lrub_1233

0.648

murA

0.632

Your Current Organism:

Legionella rubrilucens

NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Lrub_0264	Lrub_0265	Lrub_0264	Lrub_0265	ABC transporter permease.	ABC transporter ATP binding protein.	0.998
Lrub_0264	Lrub_1232	Lrub_0264	Lrub_1232	ABC transporter permease.	Putative anti-sigma-B factor antagonist (Anti-anti-sigma-B factor).	0.697
Lrub_0264	ttg2A	Lrub_0264	Lrub_1228	ABC transporter permease.	Toluene tolerance ABC transporter ATP binding protein Ttg2A.	0.982
Lrub_0264	ttg2B	Lrub_0264	Lrub_1229	ABC transporter permease.	Toluene tolerance protein Ttg2B.	0.762
Lrub_0264	ttg2D	Lrub_0264	Lrub_1231	ABC transporter permease.	Toluene tolerance protein Ttg2D.	0.651
Lrub_0264	yrbD	Lrub_0264	Lrub_1230	ABC transporter permease.	Toluene transporter subunit: membrane component of ABC superfamily protein.	0.990
Lrub_0265	Lrub_0264	Lrub_0265	Lrub_0264	ABC transporter ATP binding protein.	ABC transporter permease.	0.998
Lrub_0265	Lrub_1232	Lrub_0265	Lrub_1232	ABC transporter ATP binding protein.	Putative anti-sigma-B factor antagonist (Anti-anti-sigma-B factor).	0.736
Lrub_0265	Lrub_1916	Lrub_0265	Lrub_1916	ABC transporter ATP binding protein.	ABC transporter permease.	0.919
Lrub_0265	ttg2A	Lrub_0265	Lrub_1228	ABC transporter ATP binding protein.	Toluene tolerance ABC transporter ATP binding protein Ttg2A.	0.573
Lrub_0265	ttg2B	Lrub_0265	Lrub_1229	ABC transporter ATP binding protein.	Toluene tolerance protein Ttg2B.	0.977
Lrub_0265	ttg2D	Lrub_0265	Lrub_1231	ABC transporter ATP binding protein.	Toluene tolerance protein Ttg2D.	0.654
Lrub_0265	yrbD	Lrub_0265	Lrub_1230	ABC transporter ATP binding protein.	Toluene transporter subunit: membrane component of ABC superfamily protein.	0.980
Lrub_0992	ttg2B	Lrub_0992	Lrub_1229	Lipoprotein VacJ-like protein.	Toluene tolerance protein Ttg2B.	0.422
Lrub_0992	ttg2D	Lrub_0992	Lrub_1231	Lipoprotein VacJ-like protein.	Toluene tolerance protein Ttg2D.	0.883
Lrub_0992	yrbD	Lrub_0992	Lrub_1230	Lipoprotein VacJ-like protein.	Toluene transporter subunit: membrane component of ABC superfamily protein.	0.798
Lrub_1232	Lrub_0264	Lrub_1232	Lrub_0264	Putative anti-sigma-B factor antagonist (Anti-anti-sigma-B factor).	ABC transporter permease.	0.697
Lrub_1232	Lrub_0265	Lrub_1232	Lrub_0265	Putative anti-sigma-B factor antagonist (Anti-anti-sigma-B factor).	ABC transporter ATP binding protein.	0.736
Lrub_1232	Lrub_1233	Lrub_1232	Lrub_1233	Putative anti-sigma-B factor antagonist (Anti-anti-sigma-B factor).	BolA like protein; Belongs to the BolA/IbaG family.	0.636
Lrub_1232	Lrub_1916	Lrub_1232	Lrub_1916	Putative anti-sigma-B factor antagonist (Anti-anti-sigma-B factor).	ABC transporter permease.	0.560