Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ttg2DToluene tolerance protein Ttg2D. (201 aa)    
Predicted Functional Partners:
yrbD
Toluene transporter subunit: membrane component of ABC superfamily protein.
 
 0.999
Lrub_1232
Putative anti-sigma-B factor antagonist (Anti-anti-sigma-B factor).
  
 
 0.996
ttg2B
Toluene tolerance protein Ttg2B.
 
 
 0.991
ttg2A
Toluene tolerance ABC transporter ATP binding protein Ttg2A.
 
 
 0.988
Lrub_0992
Lipoprotein VacJ-like protein.
 
 
 
 0.970
Lrub_0266
ABC transport system periplasmic substrate binding protein.
  
 0.957
Lrub_0264
ABC transporter permease.
  
 
 0.894
Lrub_0265
ABC transporter ATP binding protein.
  
 
 0.894
Lrub_1915
Putative transmembrane protein.
 
 0.850
Lrub_1233
BolA like protein; Belongs to the BolA/IbaG family.
       0.770
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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