STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_1235Putative NIF3-like protein 1. (252 aa)    
Predicted Functional Partners:
Lrub_1233
BolA like protein; Belongs to the BolA/IbaG family.
 
     0.826
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.800
mutT_2
Mutator MutT protein.
    
  0.725
rir1
Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 
  0.642
ttg2D
Toluene tolerance protein Ttg2D.
       0.636
Lrub_1232
Putative anti-sigma-B factor antagonist (Anti-anti-sigma-B factor).
       0.636
ttg2A
Toluene tolerance ABC transporter ATP binding protein Ttg2A.
       0.632
ttg2B
Toluene tolerance protein Ttg2B.
       0.632
yrbD
Toluene transporter subunit: membrane component of ABC superfamily protein.
       0.632
folE
GTP cyclohydrolase I.
    
 0.620
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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