STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_1269O-methyltransferase. (331 aa)    
Predicted Functional Partners:
yhdE
Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
 
      0.900
ispB_2
Octaprenyl diphosphate synthase IspB.
  
 
 0.698
Lrub_1438
2-acylglycerophosphoethanolamine acyltransferase.
     
 0.630
Lrub_2199
Cytokinin oxidase.
  
     0.625
bioI
Biotin biosynthesis cytochrome P450.
  
 0.615
Lrub_1270
General secretion pathway protein C.
       0.594
Lrub_1271
Sel-1 protein.
       0.594
Lrub_1268
Hypothetical protein.
       0.511
Lrub_1299
6-hydroxynicotinate 3-monooxygenase precursor.
  
 
 0.488
Lrub_0358
Hypothetical protein.
  
     0.481
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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