Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
Lrub_1279DegP protease. (360 aa)    
Predicted Functional Partners:
Lrub_1278
Hypothetical protein.
       0.793
Lrub_1277
Hypothetical protein.
       0.690
Lrub_0166
Sensory box histidine kinase/response regulator.
 
  
 0.686
Lrub_1276
Hypothetical protein.
       0.684
Lrub_1898
Hypothetical protein.
    
 
 0.679
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
    
  0.575
mutY
A/G specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
     
 0.567
Lrub_0225
3-oxoacyl-ACP reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  0.549
Lrub_1932
Cytosolic IMP-GMP specific 5'-nucleotidase.
  
     0.507
Lrub_0224
YcaC related amidohydrolase.
  
    0.479
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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