STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_1279DegP protease. (360 aa)    
Predicted Functional Partners:
Lrub_1898
Hypothetical protein.
    
 
 0.794
Lrub_1278
Hypothetical protein.
       0.787
Lrub_0166
Sensory box histidine kinase/response regulator.
 
  
 0.687
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
    
 0.628
Lrub_1872
Sensory box histidine kinase/response regulator.
  
  
 0.578
kefC_2
Glutathione-regulated potassium efflux system; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
   
 0.518
Lrub_1932
Cytosolic IMP-GMP specific 5'-nucleotidase.
  
     0.507
Lrub_1277
Hypothetical protein.
       0.506
Lrub_1276
Hypothetical protein.
       0.497
ctpA_2
Carboxy-terminal protease; Belongs to the peptidase S41A family.
 
  
 0.461
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.