STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_1364Glutamate synthase; Belongs to the glutamate synthase family. (523 aa)    
Predicted Functional Partners:
fadH
2,4-dienoyl-CoA reductase FadH1.
 
 0.999
Lrub_0662
Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.966
Lrub_0786
Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.966
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.820
glnA
Glutamine synthetase.
  
 
 0.751
argF
Ornithine carbamoyltransferase.
  
 
 0.703
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.699
Lrub_0834
Oxaloacetate decarboxylase subunit alpha.
   
 
 0.692
Lrub_2591
Sulfate transporter.
     
 0.692
icd
Isocitrate dehydrogenase.
    
 0.684
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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