STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_1381Glucoamylase. (432 aa)    
Predicted Functional Partners:
Lrub_1611
Aminopeptidase.
  
     0.734
Lrub_2824
Chitinase.
  
  
 0.659
treF
Alpha,alpha-trehalase.
  
  
  0.617
lapB
Tetratricopeptide repeat protein; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane; Belongs to the LapB family.
      
 0.613
Lrub_0931
Serine metalloprotease; Belongs to the peptidase S8 family.
  
     0.607
Lrub_2374
Pyoverdine biosynthesis protein PvcA.
  
     0.600
Lrub_1382
Hypothetical protein.
       0.580
chiA
Chitinase A precursor.
  
     0.579
Lrub_1587
Phospholipase/lecithinase/hemolysin.
  
     0.558
Lrub_0540
L-gulono-gamma-lactone oxidase.
  
     0.550
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.