Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hypBHydrogenase expression/formation protein HypB. (242 aa)    
Predicted Functional Partners:
hypA
Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
 
 0.997
hypC
Hydrogenase expression/formation protein HypC.
 
  
 0.990
hypD
Hydrogenase expression/formation protein HypD; Belongs to the HypD family.
 
  
 0.990
hypE
Hydrogenase expression/formation protein HypE.
 
  
 0.957
hypF
Hydrogenase maturation protein HypF.
 
   
 0.952
Lrub_1453
Hydrogenase expression/formation protein.
     
 0.738
Lrub_1452
Coenzyme F420-reducing hydrogenase, alpha subunit.
     
 0.706
Lrub_1449
Hydrogenase subunit.
     
 0.692
Lrub_1451
Sulfhydrogenase subunit delta.
     
 0.692
hydG
Hydrogenase/sulfur reductase gamma subunit.
       0.667
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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