STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_1458PAP2 superfamily protein. (389 aa)    
Predicted Functional Partners:
Lrub_1459
Regulatory protein (GGDEF and EAL domains).
     
 0.825
lasB
Virulence metalloprotease; Extracellular zinc metalloprotease.
   
 0.784
ftsK
Cell division protein FtsK.
    
 
 0.783
Lrub_1372
Hypothetical protein.
    
   0.779
fixL
Sensor histidine kinase.
       0.773
Lrub_0931
Serine metalloprotease; Belongs to the peptidase S8 family.
  
 0.694
Lrub_2824
Chitinase.
   
 
 0.686
amiB
N-acetylmuramoyl-L-alanine amidase.
    
 0.580
Lrub_1873
L-sorbosone dehydrogenase.
  
  
  0.545
tesA
Esterase TesA precursor.
  
 
  0.542
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.