STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_1477MerR family regulatory protein. (64 aa)    
Predicted Functional Partners:
Lrub_1478
Putative type I restriction enzyme M protein.
  
    0.732
Lrub_1479
ecoKI restriction-modification system protein HsdS.
  
    0.718
Lrub_1480
Type I restriction enzyme EcoKI subunit R.
  
    0.681
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.647
Lrub_1481
Hypothetical protein.
 
     0.550
Lrub_1475
Hypothetical protein.
       0.524
Lrub_1476
Hypothetical protein.
       0.524
pta_1
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
     
  0.454
pta_2
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
     
  0.454
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.