STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_1504GNAT family acetyltransferase. (146 aa)    
Predicted Functional Partners:
Lrub_1507
N-acetyltransferase GCN5.
  
     0.774
Lrub_2726
GNAT family acetyltransferase.
  
     0.774
grpB
Glutamate rich protein GrpB.
 
    0.633
Lrub_0591
GNAT family acetyltransferase.
 
  
  0.610
Lrub_1848
Hypothetical protein.
   
   0.559
Lrub_2333
Multidrug resistance ABC transporter ATP binding protein.
 
     0.543
uup_2
ABC transporter ATP-binding protein Uup.
       0.462
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.