STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_1508Glyoxalase/bleomycin resistance protein/dioxygenase. (125 aa)    
Predicted Functional Partners:
Lrub_2818
Glyoxalase-like domain protein.
 
 
 0.631
Lrub_1507
N-acetyltransferase GCN5.
 
     0.603
Lrub_1509
Methyltransferase.
       0.601
Lrub_2416
Hypothetical protein.
  
     0.592
sidB
Substrate of the Dot/Icm system.
  
     0.502
Lrub_1506
Aminoglycoside 6'-N-acetyltransferase.
       0.454
Lrub_1510
Cupin domain protein.
       0.446
Lrub_0850
Alanine racemase.
   
 
  0.438
Lrub_2307
Putative DNA-binding transcriptional regulator.
  
     0.412
Lrub_1505
Hypothetical protein.
       0.401
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.