STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_1570Hypothetical protein. (343 aa)    
Predicted Functional Partners:
Lrub_1571
Hypothetical protein.
   
 0.984
Lrub_1573
KQDN repeat-containing protein.
 
   
 0.959
Lrub_1568
Hypothetical protein.
 
  
 0.957
Lrub_1572
TPR repeat containing protein.
   
 0.954
moxR
Methanol dehydrogenase regulatory protein.
 
 
 0.953
Lrub_1569
Hypothetical protein.
 
     0.951
bchD
Magnesium-chelatase 60 kDa subunit; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
 0.889
comM_2
Competence related protein ComM; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
 0.889
cobN
Aerobic cobaltochelatase subunit CobN.
  
 0.643
Lrub_0793
Oxidoreductase, FAD-binding protein.
   
 
  0.642
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.