Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lrub_1611Aminopeptidase. (395 aa)    
Predicted Functional Partners:
Lrub_1381
Glucoamylase.
  
     0.734
Lrub_1610
Hypothetical protein.
       0.728
Lrub_0931
Serine metalloprotease; Belongs to the peptidase S8 family.
  
  
 0.721
Lrub_2695
Transmembrane protein.
  
     0.583
gacS/letS
Transmission sensor LetS.
  
 
   0.567
Lrub_1911
Hemagglutinin/protease, zinc metalloprotease; Extracellular zinc metalloprotease.
 
  
 0.533
proA
Zinc metalloproteinase precursor; Extracellular zinc metalloprotease.
 
  
 0.524
lasB
Virulence metalloprotease; Extracellular zinc metalloprotease.
 
  
 0.489
Lrub_2561
Glutamine amidotransferase.
  
     0.484
Lrub_1325
Putative thermolabile hemolysin.
  
     0.467
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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