STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_1626Siderophore synthetase component. (576 aa)    
Predicted Functional Partners:
Lrub_1625
Multidrug resistance efflux pump.
 
    0.825
Lrub_1624
Drug resistance transporter, Bcr/CflA.
 
     0.812
lysAC
Bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.681
Lrub_1506
Aminoglycoside 6'-N-acetyltransferase.
 
 
 0.641
Lrub_1623
Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.607
Lrub_1753
Hypothetical protein.
  
     0.578
hda
ATPase regulatory factor involved in DnaA inactivation; Belongs to the DnaA family. HdA subfamily.
       0.562
Lrub_0763
Hypothetical protein.
  
     0.559
Lrub_1809
Hypothetical protein.
  
     0.549
Lrub_2783
Hypothetical protein.
  
     0.518
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.