STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_1682Signal transduction protein. (380 aa)    
Predicted Functional Partners:
Lrub_1681
RDD family protein.
       0.616
Lrub_1765
Flagellar hook-length control protein FliK.
  
     0.558
Lrub_0104
Putative flagellar hook-length control protein.
  
     0.548
Lrub_1295
Muramidase, peptidoglycan hydrolase FlgJ.
 
     0.529
flgK
Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family.
 
     0.529
Lrub_1275
Putative asmA protein.
  
     0.482
Lrub_0140
HDOD domain protein.
  
     0.476
sdhC
Succinate dehydrogenase, cytochrome b556 subunit.
       0.451
sdhD
Succinate dehydrogenase, hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH).
       0.451
sdhA_1
Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
       0.450
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.