STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_1745Polysaccharide deacetylase. (272 aa)    
Predicted Functional Partners:
Lrub_2009
Protein IcmE (DotG).
  
     0.733
Lrub_0528
Glycosyltransferase, family 2.
  
 
 0.697
Lrub_0298
DotA.
  
     0.688
enhA_4
Enhanced entry protein EnhA.
  
     0.664
lvrA
Legionella vir region protein.
  
     0.659
Lrub_1740
Transmembrane protein.
  
     0.649
Lrub_0969
Ankyrin repeat domain-containing protein.
  
     0.646
enhA_1
Enhanced entry protein EnhA.
  
     0.645
Lrub_2606
Cysteine protease.
  
     0.626
Lrub_0035
Enhanced entry protein EnhA.
  
     0.621
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.