Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lrub_1873L-sorbosone dehydrogenase. (381 aa)    
Predicted Functional Partners:
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
  0.735
Lrub_1874
Hypothetical protein.
 
     0.676
Lrub_1766
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion.
   
 
  0.670
Lrub_1872
Sensory box histidine kinase/response regulator.
 
   
 0.626
Lrub_1870
Regulatory protein (GGDEF domain).
       0.565
Lrub_1871
Two-component response regulator.
       0.565
Lrub_1510
Cupin domain protein.
 
     0.450
Lrub_1875
Sensor histidine kinase.
       0.446
cycA
Cytochrome c.
  
  
  0.446
gap
Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
     
 0.435
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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