STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_2013IcmJ protein. (210 aa)    
Predicted Functional Partners:
icmP
IcmP protein.
   
 
 0.950
Lrub_2003
Protein IcmO (DotL).
   
 
 0.950
Lrub_0082
Hypothetical protein.
    
   0.919
Lrub_2520
Substrate of the Dot/Icm secretion system.
    
   0.919
icmD
Protein IcmD (DotP).
      0.744
Lrub_2014
Protein IcmB (DotO).
       0.661
Lrub_2009
Protein IcmE (DotG).
     
 0.596
Lrub_2010
Protein IcmG (DotF).
     
 0.559
Lrub_2011
IcmC (DotE).
       0.544
Lrub_2008
IcmK protein.
     
 0.531
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.