Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
uptCType II secretion system protein. (372 aa)    
Predicted Functional Partners:
Lrub_0053
Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
  
   
 0.858
pilM
Tfp pilus assembly protein, ATPase PilM.
  
  
 0.858
pilC
Pilus assembly protein PilC.
 
   
 0.823
lspF
Type II secretory pathway protein LspF.
 
   
 0.793
pilQ
Type IV pilus (Tfp) assembly protein PilQ.
  
  
 0.736
Lrub_2085
Recombinase B.
       0.732
Lrub_2087
Hypothetical protein.
       0.667
Lrub_1177
Type IV pilus biogenesis protein PilO.
  
  
 0.620
Lrub_2089
Hypothetical protein.
       0.619
Lrub_2090
Hypothetical protein.
       0.619
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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