Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lrub_2185Pterin-4-alpha-carbinolamine dehydratase. (112 aa)    
Predicted Functional Partners:
Lrub_2046
Phenylalanine-4-hydroxylase.
 
 0.996
hisC-2
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
 0.870
lly
4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.846
Lrub_2188
Hypothetical protein.
       0.738
Lrub_2189
Hypothetical protein.
       0.738
hmgA
Homogentisate 1,2-dioxygenase.
  
  
 0.654
Lrub_2187
Hypothetical protein.
       0.527
Lrub_0666
Glutathione S-transferase (maleylacetoacetate isomerase).
  
  
 0.436
Lrub_0919
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
 
   
 0.404
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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