Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lrub_2208Bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase. (254 aa)    
Predicted Functional Partners:
Lrub_2207
Hypothetical protein.
       0.762
ispB_2
Octaprenyl diphosphate synthase IspB.
   
 0.647
Lrub_2209
GDSL-like Lipase/Acylhydrolase.
       0.603
Lrub_2206
Hypothetical protein.
       0.535
Lrub_0793
Oxidoreductase, FAD-binding protein.
     
  0.480
Lrub_1438
2-acylglycerophosphoethanolamine acyltransferase.
     
 0.466
petC_2
Cytochrome b6-f complex iron-sulfur subunit.
  
 0.460
ubiG_2
Ubiquinone biosynthesis O-methyltransferase.
       0.419
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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