STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_2209GDSL-like Lipase/Acylhydrolase. (222 aa)    
Predicted Functional Partners:
Lrub_2740
FtsX-like permease family protein.
 
 
   0.691
Lrub_2706
Chitinase.
  
 0.629
celA
Endoglucanase A precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 0.629
Lrub_2208
Bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase.
       0.603
Lrub_2207
Hypothetical protein.
       0.595
ubiG_2
Ubiquinone biosynthesis O-methyltransferase.
       0.523
Lrub_2741
ABC transporter ATP binding protein.
 
 
   0.518
Lrub_2206
Hypothetical protein.
       0.428
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.