STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
helC_2HelC protein. (414 aa)    
Predicted Functional Partners:
helB_2
HelB protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.964
helA_2
HelA protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.949
helB_1
HelB protein.
 
  0.853
helA_1
HelA protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.799
cebB
Chemiosmotic efflux system B protein B; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.745
Lrub_1806
Chemiosmotic efflux system B protein C.
  
     0.736
Lrub_1804
Chemiosmotic efflux system B protein A; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.723
Lrub_0770
Chemiosmotic efflux system B protein A.
  
 
 0.608
Lrub_2722
Membrane-fusion protein AcrA.
  
  0.607
ppsA
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
  
    0.548
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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