STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_2288Flavin containing monooxygenase. (511 aa)    
Predicted Functional Partners:
Lrub_2289
Coiled coil protein.
       0.773
fadH
2,4-dienoyl-CoA reductase FadH1.
     
 0.693
bioI
Biotin biosynthesis cytochrome P450.
 
 0.684
Lrub_2293
Enoyl-CoA hydratase/carnithine racemase.
 
 
   0.642
Lrub_0657
Lipase.
 
 
 0.620
Lrub_2045
Sterol desaturase-related protein.
 
     0.608
recQ
ATP-dependent DNA helicase RecQ.
       0.601
Lrub_0358
Hypothetical protein.
  
     0.594
Lrub_2292
3-hydroxyisobutyryl-CoA hydrolase.
   
   0.581
Lrub_2159
Hypothetical protein.
  
     0.552
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.