STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lrub_2335Putative glycosyl transferase. (397 aa)    
Predicted Functional Partners:
rfbA
Phosphomannose isomerase GDP mannose pyrophosphorylase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.846
wzt
ABC transporter of LPS O-antigen.
 
 
 0.620
wzm
ABC transporter of LPS O-antigen, Wzm.
 
  
 0.526
ugd
UDP-glucose 6-dehydrogenase.
 
  
 0.518
galU
Glucose-1-phosphate uridylyltransferase.
 
  
 0.486
trxA
Thioredoxin.
       0.480
Lrub_2405
Hypothetical protein.
 
 0.480
Lrub_2336
Hypothetical protein.
       0.473
Lrub_2842
O-antigen biosynthesis protein.
  
 
 0.466
apaH
Bis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.461
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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