STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_2340Hypothetical protein. (126 aa)    
Predicted Functional Partners:
idi
Isopentenyl-diphosphate Delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
  
 
 0.975
Lrub_2045
Sterol desaturase-related protein.
   
 0.948
Lrub_1024
Hypothetical protein.
    
 0.811
Lrub_1666
Hypothetical protein.
  
     0.774
Lrub_1727
Hypothetical protein; Belongs to the UPF0235 family.
  
     0.771
Lrub_0482
Squalene and phytoene synthase.
  
 
 0.768
bioI
Biotin biosynthesis cytochrome P450.
    
 0.758
Lrub_1426
Thaumatin domain-containing protein.
  
     0.717
Lrub_2707
Protein kinase domain protein.
  
     0.706
Lrub_2341
HAD-superfamily hydrolase.
 
   
 0.670
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.