Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Lrub_23554-hydroxy-2-oxovalerate aldolase. (294 aa)    
Predicted Functional Partners:
dlpA
DlpA protein (isocitrate and isopropylmalate dehydrogenase family protein).
 
 0.986
Lrub_1989
Aminodeoxychorismate lyase.
 
 0.865
Lrub_2356
Hypothetical protein.
   
  0.837
Lrub_2354
UDP-N-acetylmuramyl tripeptide synthase.
       0.825
ala
D-alanine-aminotransferase.
  
 0.819
Lrub_2358
Hypothetical protein.
       0.787
poxB
Pyruvate dehydrogenase; Belongs to the TPP enzyme family.
  
 
 0.774
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.750
Lrub_1018
Acyl CoA carboxylase subunit alpha.
  
 
 0.738
Lrub_1672
Pyruvate carboxylase subunit A; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
 0.738
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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