STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_2373LysR family transporter transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (298 aa)    
Predicted Functional Partners:
Lrub_2375
Pyoverdine biosynthesis protein PvcB.
 
     0.719
Lrub_2374
Pyoverdine biosynthesis protein PvcA.
 
     0.671
bioI
Biotin biosynthesis cytochrome P450.
 
     0.647
bcp
Acetylpolyamine aminohydrolase.
  
     0.547
Lrub_2372
Carboxymuconolactone decarboxylase family transporter; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.542
Lrub_2824
Chitinase.
  
     0.531
Lrub_1775
Transmembrane protein.
  
    0.526
Lrub_0512
Potassium efflux system KefA.
  
     0.466
Lrub_0540
L-gulono-gamma-lactone oxidase.
  
     0.449
chiA
Chitinase A precursor.
  
     0.448
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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