STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_2441ABC transporter permease. (257 aa)    
Predicted Functional Partners:
Lrub_2440
ABC transporter ATP binding protein.
 
 0.987
Lrub_1420
Nitroreductase.
  
  
 0.761
Lrub_2383
ABC transporter ATP-binding protein.
 
 
 0.728
Lrub_2439
2OG-Fe(II) oxygenase.
       0.629
wzm
ABC transporter of LPS O-antigen, Wzm.
    
  0.626
ftsE
Cell division ATP transporter FtsE; Part of the ABC transporter FtsEX involved in cellular division.
  
 
 0.594
Lrub_2438
Hypothetical protein.
       0.502
ugpE
Sn-glycerol-3-phosphate transport system permease protein ugpE; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
     
 0.436
lptB
Lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily protein.
    
  0.401
Lrub_0264
ABC transporter permease.
    
  0.400
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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