Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lrub_2453Ribosomal protein S6 modification protein. (496 aa)    
Predicted Functional Partners:
Lrub_2454
Glutamate--cysteine ligase, GCS2.
 
  
 0.974
Lrub_2452
Hypothetical protein.
 
     0.968
Lrub_2455
N-formylglutamate amidohydrolase.
 
     0.968
Lrub_2451
Sensory box protein.
       0.497
Lrub_2449
Aromatic compounds catabolism.
       0.448
argF
Ornithine carbamoyltransferase.
    
  0.446
Lrub_2450
Hypothetical protein.
       0.436
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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