Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
furFerric uptake regulation protein; Belongs to the Fur family. (139 aa)    
Predicted Functional Partners:
smpA
tmRNA-binding small protein A.
  
    0.756
yjgR
ATPase.
       0.755
rpoA
DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.670
Lrub_2619
Putative thioredoxin 1; Belongs to the thioredoxin family.
   
 
 0.667
Lrub_2019
Alkylhydroperoxide reductase, AhpC/TSA family.
  
  
 0.647
ahpC
Alkyl hydroperoxide reductase.
  
  
 0.647
Lrub_0193
CoA-binding protein.
  
    0.612
Lrub_2456
Hypothetical protein.
       0.532
Lrub_1872
Sensory box histidine kinase/response regulator.
   
 
 0.512
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.511
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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